Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941075.1_cds_XP_016485087.1_76043
CDS Infomation

[gene=LOC107805544] [db_xref=GeneID:107805544] [protein=E3 ubiquitin-protein ligase RING1-like] [protein_id=XP_016485087.1] [location=complement(41312..42352)] [gbkey=CDS]
Sequence

ATGTCGATGTCGTCGAATTATTGGTGCTATAGATGCAATAGATTTATTACAGTACGGAAC
CAAGATTCAATCACATGCCTCAACTGCAACAGTGGGTTCGTCGAAGAAGTGGTCGAGACT
CCCAACAGATTCTCACTGTCCGCTTCTCGACGGCGTCGTTTCCCTGCAGTGGCTTCTGAT
TCAAGTTCAATTCTTCAGAGGAGCAGGAGAAATGGTGGTGATAGGTCACCCTTTAACCCT
GTCATCGTCCTCAGAAGTCCTTCCCGTGGCGGTGGTGATGGTGGTGGAGGGGCTGCAGGA
GCATTTGAGCTGTATTACGGAGATGGATCTGGGTCGGGTTTCAGGCCCTTGCCCGCAAGT
ATGTCGGAGTTTCTACTTGGATCGGGCTTCGATAGGCTTCTGGATCAGTTAGCACAGATT
GATGTTGGAAGAATTGAAAATCCACCAGCTTCGAAAGCTGCAATCGAGTCAATGGCAACC
ATTGAGATTGTTCCTTCACATGTGGATGTAGAATCTCACTGTGCTGTTTGTATGGAGTCC
TTCGAGCTGGGAACTGAGGCTCGCGAAATGCCCTGTAAGCATTTATATCATTCCGATTGT
ATTCTACCATGGCTGTCGCTGCGGAATTCTTGCCCTGTTTGTAGACAGGAATTGCCCACC
GAGAGTGGTGGAGATTCAAATGAGCAAAATAGAAATGTAGGAAATGATGATGAAGCTGTT
GGTTTAACAATATGGAGATTGCCAGGAGGTGGATTTGCGGTTGGGAGGTTTGGGAGGAGG
GTGGGTGGGGAACGAGAGATGCCTGTTGTATATACAGAGATGGATGGAGGGTTCAATAGC
AATGGGGTTCCGAGAAGGATTTCATGGGGTTCTGGAGGAGGGAGAGTGTCGCAGCAAAAT
GGGGGTTTGAGGAGACTATTTTGCAGTTTCTTTTCGTGTTTTGGGGGGGCTGCTTCATCC
AGCTCCGAGACCTCTGGTTCAGATTCGAGGATAAATCGTAACACAAGTGGTTCATTGTCA
TCTGTTTTCATCTCTACATGA

Peptide Sequence

PEP ID

XP_016485087.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nicotiana tabacum]
Sequence

MSMSSNYWCYRCNRFITVRNQDSITCLNCNSGFVEEVVETPNRFSLSASRRRRFPAVASD
SSSILQRSRRNGGDRSPFNPVIVLRSPSRGGGDGGGGAAGAFELYYGDGSGSGFRPLPAS
MSEFLLGSGFDRLLDQLAQIDVGRIENPPASKAAIESMATIEIVPSHVDVESHCAVCMES
FELGTEAREMPCKHLYHSDCILPWLSLRNSCPVCRQELPTESGGDSNEQNRNVGNDDEAV
GLTIWRLPGGGFAVGRFGRRVGGEREMPVVYTEMDGGFNSNGVPRRISWGSGGGRVSQQN
GGLRRLFCSFFSCFGGAASSSSETSGSDSRINRNTSGSLSSVFIST

Transcript Sequence

Gene sequence data has not been registered.